Input File |
Description |
|---|---|
SAPT0 cc-pVDZ computation of the ethene-ethyne interaction energy, using the cc-pVDZ-JKFIT RI basis for SCF and cc-pVDZ-RI for SAPT. Monomer geometries are specified using Cartesian coordinates. |
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SAPT(DFT) aug-cc-pVDZ interaction energy between Ne and Ar atoms. |
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Test of SFX2C-1e on water uncontracted cc-pVDZ-DK The reference numbers are from Lan Cheng’s implementation in Cfour |
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ROHF 6-31G** energy of the |
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Single point gradient of 1-1B2 state of H2O with EOM-CCSD |
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Single point energies of multiple excited states with EOM-CCSD |
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SCF level shift on a CUHF computation |
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Quick test of external potential in F-SAPT (see fsapt1 for a real example) |
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ROHF-CCSD(T) cc-pVDZ frozen-core energy for the |
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MP2 cc-pVDZ gradient for the H2O molecule. |
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SAPT2+(3) aug-cc-pVDZ computation of the formamide dimer interaction energy, using the aug-cc-pVDZ-JKFIT DF basis for SCF and aug-cc-pVDZ-RI for SAPT. This example uses frozen core as well as MP2 natural orbital approximations. |
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SAPT(DFT) aug-cc-pVDZ interaction energy between Ne and Ar atoms. |
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RHF-CC2-LR/STO-3G optical rotation of (S)-methyloxirane. gauge = length, omega = (589 355 nm) |
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Benzene vertical singlet-triplet energy difference computation, using the PubChem database to obtain the initial geometry, which is optimized at the HF/STO-3G level, before computing single point energies at the RHF, UHF and ROHF levels of theory. |
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EOM-CC3(ROHF) on CH radical with user-specified basis and properties for particular root |
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Database calculation, so no molecule section in input file. Portions of the full databases, restricted by subset keyword, are computed by sapt0 and dfmp2 methods. |
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Sample UHF/cc-pVDZ H2O computation on a doublet cation, using RHF/cc-pVDZ orbitals for the closed-shell neutral as a guess |
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Various gradients for a strained helium dimer and water molecule |
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usapt example with empty beta |
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SOS-OMP3 cc-pVDZ geometry optimization for the H2O molecule. |
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This test case shows an example of running and analyzing a standard F-SAPT0/jun-cc-pvdz procedure for HSG-18-dimer from the HSG database. |
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RHF STO-3G (Cartesian) and cc-pVDZ (spherical) water Hessian test, against Psi3 reference values. |
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Test if the the guess read in the same basis converges. |
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EOM-CC3/cc-pVTZ on H2O |
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RHF cc-pVDZ energy for water, automatically scanning the symmetric stretch and bending coordinates using Python’s built-in loop mechanisms. The geometry is specified using a Z-matrix with variables that are updated during the potential energy surface scan, and then the same procedure is performed using polar coordinates, converted to Cartesian coordinates. |
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Mk-MRCCSD single point. |
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SAPT(DFT) aug-cc-pVDZ interaction energy between Ne and Ar atoms. |
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Fractional occupation with symmetry |
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6-31G** UHF CH2 3B1 optimization. Uses a Z-Matrix with dummy atoms, just for demo and testing purposes. |
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checks that all SAPT physical components (elst, exch, indc, disp) and total IE are being computed correctly for SAPT2+3(CCD)dMP2/aug-cc-pvdz and all lesser methods thereof. |
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DF-CCSD cc-pVDZ energy for the H2O molecule. |
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File retention, docc, socc, and bond distances specified explicitly. |
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DF-MP2 cc-pVDZ frozen core gradient of benzene, computed at the DF-SCF cc-pVDZ geometry |
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Example of state-averaged CASSCF for the C2 molecule see C. D. Sherrill and P. Piecuch, J. Chem. Phys. 122, 124104 (2005) |
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ROHF-CCSD(T) cc-pVDZ energy for the |
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force occupations in scf |
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MBIS calculation on OH radical |
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External potential calculation with one Ghost atom and one point charge at the same position. |
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A range-seperated gradient for SO2 to test disk algorithms by explicitly setting low memory |
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check all variety of options parsing |
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MP3 cc-pVDZ gradient for the NO radical |
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OMP2.5 cc-pVDZ gradient for the H2O molecule. |
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MP3 cc-pVDZ gradient for the H2O molecule. |
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SCF cc-pVDZ geometry optimzation of ketene, starting from bent structure |
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Lithium test for coverage |
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Kr–Kr nocp energies with all-electron basis set to check frozen core |
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CCSD/sto-3g optical rotation calculation (length gauge only) at two frequencies on methyloxirane |
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Vibrational and thermo analysis of several water isotopologs. Demonstrates Hessian reuse for different temperatures, pressures, and isotopologs |
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Sample HF/cc-pVDZ H2O computation all derivatives |
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DC-06 calculation for the He dimer. This performs a two-step update of the orbitals and cumulant, using DIIS extrapolation. Four-virtual integrals are handled in the MO Basis. |
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Electrostatic potential and electric field evaluated on a grid around water. |
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RHF-ODC-12 analytic gradient computations for H2O use AO_BASIS=DISK and AO_BASIS=NONE, respectively. RHF-ODC-06 analytic gradient computations for H2O use AO_BASIS=DISK and AO_BASIS=NONE, respectively. |
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HF/cc-pVDZ many body energies of an arbitrary noble gas trimer complex Size vs cost tradeoff is rough here |
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Test FNO-DF-CCSD(T) energy |
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SAPT0 aug-cc-pVDZ computation of the benzene-methane interaction energy, using the aug-pVDZ-JKFIT DF basis for SCF, the aug-cc-pVDZ-RI DF basis for SAPT0 induction and dispersion, and the aug-pVDZ-JKFIT DF basis for SAPT0 electrostatics and induction. This example uses frozen core as well as asyncronous I/O while forming the DF integrals and CPHF coefficients. |
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density fitted OO-REMP/cc-pVDZ engrad single points for the H2O molecule. |
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Test method/basis with disk_df |
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DF-OMP2.5 cc-pVDZ energy for the H2O molecule. |
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comparison of DF-MP2 and DLPNO-MP2 |
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Sample UHF/6-31G** CH2 computation |
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FSAPT with external charge on dimer |
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OMP3 cc-pVDZ gradient for the H2O molecule. |
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check that CC is returning the same values btwn CC*, FNOCC, and DFOCC modules |
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Tests RHF/ROHF/UHF SCF gradients |
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TD-HF test variable access |
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cc-pvdz H2O Test CEPA(1) Energy |
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RHF interaction energies using nbody and cbs parts of the driver Ne dimer with mp2/v[dt]z + d:ccsd(t)/vdz |
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DC-06 calculation for the He dimer. This performs a simultaneous update of the orbitals and cumulant, using DIIS extrapolation. Four-virtual integrals are handled in the AO Basis, using integrals stored on disk. |
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This test case shows an example of running the I-SAPT0/aug-cc-pVDZ computation for a positively charged system, illustrating the cation-pi interaction. The SIAO1 link partitioning algorithm is used. The system is taken from http://dx.doi.org/10.1016/j.comptc.2014.02.008 |
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DSD-PBEP86 S22 Ammonia test |
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Frozen-core CCSD(T)/cc-pVDZ on C4H4N anion with disk ao algorithm |
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Optimize H2O HF/cc-pVDZ |
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This test case shows an example of running and analyzing a standard F-SAPT0/jun-cc-pvdz procedure for phenol dimer from the S22 database. |
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UHF gradient for a one-electron system (no beta electrons). |
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comparison of MP2-F12 with MPQC4 Note: MPQC4 does not use robust DF for DF-MP2-F12 MP2 convergence requires that e_conv and d_conv are 1e-10 |
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Computation of VMFC-corrected HF dimer Hessian |
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Benzene Dimer Out-of-Core HF/cc-pVDZ |
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cc3: RHF-CCSD/6-31G** H2O geometry optimization and vibrational frequency analysis by finite-differences of gradients |
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SCF 6-31G(d) optimization of TS for HCN to HNC Performs finite difference hessian calculation. Then optimizes using previous orbitals for scf guess, in subsequent calculations. The last two displacements of the hessian break the plane of symemtry, This test confirms that only the reference geometry, with the correct symmetry, writes orbitals to disk. SCF will fail (ValidationError) otherwise. |
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ROHF stability analysis check for CN with cc-pVDZ. This test corresponds to the rohf-stab test from Psi3. |
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A very quick correctness test of F-SAPT (see fsapt1 for a real example) |
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Convergence of many-body gradients of different BSSE schemes |
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OMP3 cc-pVDZ gradient for the NO radical |
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RHF orbitals and density for water. |
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DFT Functional Smoke Test |
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cc-pvdz H2O Test coupled-pair CISD against DETCI CISD |
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ADIIS test case, from 10.1063/1.3304922 |
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comparison of DF-MP2 and DLPNO-MP2 with a CBS extrapolation |
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DF-MP2 frequency by difference of energies for H2O |
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OMP2 cc-pVDZ energy for the NO molecule. |
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RHF-CCSD-LR/cc-pVDZ static polarizability of HOF |
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check that methods can act on single atom |
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integral conventional REMP/cc-pVDZ energies for the H2O molecule. results were independently verified against the initial wavels implementation |
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EOM-CCSD/6-31g excited state transition data for water with two excited states per irrep |
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F-SAPT0/jun-cc-pvdz procedure for methane dimer |
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ROHF-EOM-CCSD/DZ on the lowest two states of each irrep in |
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RKS Density Matrix based-Integral Screening Test for benzene |
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This checks that all energy methods can run with a minimal input and set symmetry. |
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CCSD/sto-3g optical rotation calculation (both gauges) at two frequencies on methyloxirane |
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OMP2 cc-pVDZ energy with ROHF initial guess orbitals for the NO radical |
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RI-SCF cc-pVTZ energy of water, with Z-matrix input and cc-pVTZ-RI auxilliary basis. |
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apply linear fragmentation algorithm to a water cluster |
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Generation of NBO file |
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DFT integral algorithms test, performing w-B97 RKS and UKS computations on water and its cation, using all of the different integral algorithms. This tests both the ERI and ERF integrals. |
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Test that Python Molecule class processes geometry like psi4 Molecule class. |
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Analytic vs. finite difference DF-SCF frequency test for water. |
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Test FNO-QCISD(T) computation |
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BH-H2+ FCI/cc-pVDZ Transition Dipole Moment |
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DFT (LDA/GGA) test of custom implementations in: gga_superfuncs.py |
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Maximum Overlap Method (MOM) Test. MOM is designed to stabilize SCF convergence and to target excited Slater determinants directly. |
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ROHF-EOM-CCSD/DZ analytic gradient lowest |
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OMP2 cc-pVDZ energy for the H2O molecule. |
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SCF STO-3G finite-differences frequencies from gradients for H2O |
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ROHF-CCSD cc-pVDZ frozen-core energy for the |
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Single point energies of multiple excited states with EOM-CCSD |
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SAPT0 with S^inf exch-disp20 |
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External potential sanity check with 0 charge far away Checks if all units behave the same and energy is same as no potential |
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SOS-OMP2 cc-pVDZ geometry optimization for the H2O molecule. |
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Various constrained energy minimizations of HOOH with cc-pvdz RHF. For “fixed” coordinates, the final value is provided by the user. |
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RHF-CCSD/cc-pVDZ energy of H2O partitioned into pair energy contributions. |
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6-31G** H2O Test CISD Energy Point |
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UHF STO-3G (Cartesian) and cc-pVDZ (spherical) water Hessian test, against Psi3 reference values. This test should match RHF values exactly |
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Spectroscopic constants of H2, and the full ci cc-pVTZ level of theory |
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RHF-CCSD(T) cc-pVQZ frozen-core energy of the BH molecule, with Cartesian input. After the computation, the checkpoint file is renamed, using the PSIO handler. |
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OLCCD cc-pVDZ energy with ROHF initial guess for the NO radical |
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This checks that all energy methods can run with a minimal input and set symmetry. |
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DF SCF 6-31G analytical vs finite-difference tests Tests DF UHF hessian code for Ca != Cb |
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This test case shows an example of running and analyzing an FI-SAPT0/jun-cc-pvdz computation for 2,4-pentanediol (targeting the intramolecular hydrogen bond between the two hydroxyl groups) |
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density fitted OO-REMP/cc-pVDZ engrad single points for the H2O+ molecule. |
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Test case for some of the PSI4 out-of-core codes. The code is given only 2.0 MB of memory, which is insufficient to hold either the A1 or B2 blocks of an ovvv quantity in-core, but is sufficient to hold at least two copies of an oovv quantity in-core. |
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Cholesky decomposed OO-REMP/cc-pVDZ energy for the H2O molecule. |
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RASCI/6-31G** H2O Energy Point |
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SCF STO-3G geometry optimzation, with Z-matrix input, by finite-differences |
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conventional and density-fitting mp2 test of mp2 itself and setting scs-mp2 |
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MBIS calculation on H2O |
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He Dimer VV10 functional test. notes: DFT_VV10_B/C overwrites the NL_DISPERSION_PARAMETERS tuple updated ‘bench’ reference values for new BraggSlater radii. |
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apply linear fragmentation algorithm to a water cluster |
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CCSD/cc-pVDZ dipole polarizability at two frequencies |
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DF SCF 6-31G UHFl vs RHF test Tests DF UHF hessian code for Ca = Cb |
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MP2.5 cc-pVDZ gradient for the NO radical |
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OLCCD cc-pVDZ energy for the H2O molecule. |
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OMP3 cc-pCVDZ energy with B3LYP initial guess for the NO radical |
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Example potential energy surface scan and CP-correction for Ne2 |
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CC2(UHF)/cc-pVDZ energy of H2O+. |
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UHF-CCSD/cc-pVDZ |
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check mixing ECP and non-ECP orbital/fitting basis sets in a session |
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Water-Argon complex with ECP present; check of RHF Hessian |
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Tests the Psi4 SF-SAPT code |
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routing check on lccd, lccsd, cepa(0). |
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Tests to determine full point group symmetry. Currently, these only matter for the rotational symmetry number in thermodynamic computations. |
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Various constrained energy minimizations of HOOH with cc-pvdz RHF Internal-coordinate constraints in internal-coordinate optimizations. |
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Density fitted MP2 cc-PVDZ/cc-pVDZ-RI computation of formic acid dimer binding energy using automatic counterpoise correction. Monomers are specified using Cartesian coordinates. |
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td-camb3lyp with DiskDF and method/basis specification |
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MP(n)/aug-cc-pVDZ BH Energy Point, with n=2-19. Compare against M. L. Leininger et al., J. Chem. Phys. 112, 9213 (2000) |
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HF and DFT variants single-points on zmat methane, mostly to test that PSI variables are set and computed correctly. Now also testing that CSX harvesting PSI variables correctly update ref_dft_2e/xc due to new BraggSlater radii |
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DCT calculation for the triplet O2 using ODC-06 and ODC-12 functionals. Only simultaneous algorithm is tested. |
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test scf castup with custom basis sets |
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CASSCF/6-31G** energy point |
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SAPT(DFT) aug-cc-pVDZ interaction energy between Ne and Ar atoms. |
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sapt example with orbital freezing with alkali metal and dMP2 |
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6-31G H2O Test FCI Energy Point |
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DCT calculation for the NH3+ radical using the ODC-12 and ODC-13 functionals. This performs both simultaneous and QC update of the orbitals and cumulant using DIIS extrapolation. Four-virtual integrals are first handled in the MO Basis for the first two energy computations. In the next computation ao_basis=disk algorithm is used, where the transformation of integrals for four-virtual case is avoided. |
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Tests OMP2 gradient in the presence of a dipole field |
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MBIS calculation on NaCl |
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Mk-MRCCSD single point. |
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Test FNO-DF-CCSD(T) energy |
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UHF Dipole Polarizability Test |
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OMP2.5 cc-pVDZ energy for the H2O molecule. |
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usapt example with empty beta due to frozen core |
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SCF DZ finite difference frequencies by gradients for C4NH4 |
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DF-OMP3 cc-pVDZ energy for the H2O+ cation |
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CC3/cc-pVDZ H2O |
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SCF STO-3G geometry optimzation, with Z-matrix input |
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Computation of VMFC-corrected water trimer Hessian (geometry from J. Chem. Theory Comput. 11, 2126-2136 (2015)) |
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DF-MP2 frequency by difference of energies for H2O |
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6-31G H2O Test FCI Energy Point |
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Test omega is setable updated wb97x_20,wb97x_03 to account for new BraggSlater radii |
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6-31G** H2O Test RASSCF Energy Point will default to only singles and doubles in the active space |
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Vibrational and thermo analysis of several water isotopologs. Demonstrates Hessian reuse for different temperatures and pressures but not for different isotopologs. |
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Symmetry tests for a range of molecules. This doesn’t actually compute any energies, but serves as an example of the many ways to specify geometries in Psi4. |
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UHF-CCSD(T) cc-pVDZ frozen-core energy for the |
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Superficial test of PubChem interface |
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B3LYP cc-pVDZ geometry optimzation of phenylacetylene, starting from not quite linear structure updated reference due to new BraggSlater radii |
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6-31G(d) optimization of SF4 starting from linear bond angle that is not linear in the optimized structure but is in a symmetry plane of the molecule. |
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SCF DZ allene geometry optimization, with Cartesian input, first in c2v symmetry, then in Cs symmetry from a starting point with a non-linear central bond angle. |
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Compute the dipole, quadrupole, and traceless quadrupoles for water. |
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DF-OMP3 cc-pVDZ energy for the H2O molecule. |
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Various constrained energy minimizations of HOOH with cc-pvdz RHF. Cartesian-coordinate constrained optimizations of HOOH in Cartesians. |
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Frequencies for H2O B3LYP/6-31G* at optimized geometry |
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SCS-OMP2 cc-pVDZ geometry optimization for the H2O molecule. |
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Water-Argon complex with ECP present; check of energies and forces. |
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Test SFX2C-1e with a static electric field on He aug-cc-pVTZ |
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F-SAPT0/jun-cc-pvdz procedure for methane dimer |
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Tests RHF CCSD(T)gradients |
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analog of fsapt-ext-abc with molecule and external potentials in Bohr |
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RHF STO-3G dipole moment computation, performed by applying a finite electric field and numerical differentiation. |
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RHF cc-pVQZ energy for the BH molecule, with Cartesian input. |
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SAPT0 aug-cc-pVDZ computation of the water-water interaction energy, using the three SAPT codes. |
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RHF-CC2-LR/cc-pVDZ static polarizabilities of HOF molecule. |
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6-31G** H2O+ Test CISD Energy Point |
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CASSCF/6-31G** energy point |
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DF-CCSD(T) cc-pVDZ energy for the H2O molecule. |
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DF-OMP2 cc-pVDZ gradients for the H2O molecule. |
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DF-MP2 cc-pVDZ gradients for the H2O molecule. |
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CASSCF/6-31G** energy point. Check energy with frozen core/virtual orbs. after semicanonicalization. |
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6-31G(d) optimization of SF4 starting from linear bond angle that is not linear in the optimized structure but is in a symmetry plane of the molecule. |
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LCCD cc-pVDZ gradient for the H2O molecule. |
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EOM-CCSD/6-31g excited state transition data for water cation |
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CASSCF/6-31G** energy point |
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6-31G** H2O+ Test CISD Energy Point |
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SCF level shift on a UHF computation |
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Compute three IP and 2 EA’s for the PH3 molecule |
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EOM-CC3(UHF) on CH radical with user-specified basis and properties for particular root |
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Intercalls among python wrappers- database, cbs, optimize, energy, etc. Though each call below functions individually, running them all in sequence or mixing up the sequence is aspirational at present. Also aspirational is using the intended types of gradients. |
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Test LDA stability analysis against QChem. |
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LCCD cc-pVDZ gradient for the NO radical |
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DF-OMP3 cc-pVDZ gradients for the H2O+ cation. |
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sapt0 of charged system in ECP basis set |
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SCF STO-3G finite-difference frequencies from energies for H2O |
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check distributed driver is correctly passing function kwargs |
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OMP2 cc-pVDZ energy for the NO molecule. |
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CASSCF/6-31G** energy point |
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CCSD dipole with user-specified basis set |
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This test case shows an example of running the I-SAPT0/jun-cc-pVDZ computation for 2,4-pentanediol (targeting the intramolecular hydrogen bond between the two hydroxyl groups) The SIAO1 link partitioning algorithm is used. |
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testing aligner on enantiomers based on Table 1 of 10.1021/ci100219f aka J Chem Inf Model 2010 50(12) 2129-2140 |
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Test fnocc with linear dependencies |
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SCF DZ allene geometry optimzation, with Cartesian input |
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Tests RHF CCSD(T)gradients |
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density fitted OO-REMP/cc-pVDZ engrad single points for the H2O+ molecule. |
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OMP2 cc-pVDZ energy for the NO radical |
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CCSD Response for H2O2 |
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OMP2.5 cc-pVDZ gradient for the NO radical |
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Test of SFX2C-1e on Water cc-pVDZ-DK. In this test the Dirac equation is solved in the uncontracted cc-pVDZ-DK basis. The reference numbers are from Lan Cheng’s implementation in Cfour |
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ROHF and UHF-B-CCD(T)/cc-pVDZ |
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Test of the superposition of atomic densities (SAD) guess, using a highly distorted water geometry with a cc-pVDZ basis set. This is just a test of the code and the user need only specify guess=sad to the SCF module’s (or global) options in order to use a SAD guess. The test is first performed in C2v symmetry, and then in C1. |
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CASSCF/6-31G** energy point |
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DF-CCSD(T) cc-pVDZ gradients for the H2O molecule. |
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Check flavors of B3LYP (b3lyp3/b3lyp5) against other programs |
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DF-CCSD cc-pVDZ gradient for the NH molecule. |
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ROHF-EOM-CCSD/DZ analytic gradient lowest |
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density fitted REMP/cc-pVDZ energies for the CO2 molecule. |
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td-uhf test on triplet states of methylene (rpa) |
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RHF-B-CCD(T)/6-31G** H2O single-point energy (fzc, MO-basis |
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RKS Linear Exchange Algorithm test for benzene |
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Tests SAPT0-D corrections, with a variety of damping functions/parameters |
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DF-CCSDL cc-pVDZ energy for the H2O molecule. |
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A test of the basis specification. A benzene atom is defined using a ZMatrix containing dummy atoms and various basis sets are assigned to different atoms. The symmetry of the molecule is automatically lowered to account for the different basis sets. |
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EOM-CC2/cc-pVDZ on H2O2 with two excited states in each irrep |
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Cholesky filter a complete basis |
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run some BLAS benchmarks |
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RHF-CCSD 6-31G** all-electron optimization of the H2O molecule |
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This checks that all energy methods can run with a minimal input and set symmetry. |
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Compute the IRC for HOOH torsional rotation at the RHF/DZP level of theory. |
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Ne-Xe dimer MP2 energies with ECP, with electrons correlated then frozen. |
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comparison of DF-MP2 and DLPNO-MP2 with a cartesian basis set |
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RHF-CC2-LR/cc-pVDZ optical rotation of H2O2. gauge = length, omega= (589 355 nm) |
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Tests analytic CC2 gradients |
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integral conventional unrestricted REMP/cc-pVDZ energies for the H2O+ molecule. results were independently verified against the initial wavels implementation |
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Example SAPT computation for ethene*ethine (i.e., ethylene*acetylene), test case 16 from the S22 database |
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wB97X-D test for a large UKS molecule update ref gradient due to new BraggSlater radii |
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DF-MP2 cc-pVDZ gradient for the NO molecule. |
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Compute the IRC for HCN <-> NCH interconversion at the RHF/DZP level of theory. |
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Test case for Binding Energy of C4H5N (Pyrrole) with CO2 using MP2/def2-TZVPP |
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SAPT calculation on bimolecular complex where monomers are unspecified so driver auto-fragments it. Basis set and auxiliary basis sets are assigned by atom type. |
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OMP2 cc-pVDZ energy for the H2O molecule. |
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SAPT2+3(CCD) aug-cc-pVDZ+midbond computation of the water dimer interaction energy, using the aug-cc-pVDZ-JKFIT DF basis for SCF and aug-cc-pVDZ-RI for SAPT. |
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Density fitted MP2 cc-PVDZ/cc-pVDZ-RI computation of formic acid dimer binding energy using explicit specification of ghost atoms. This is equivalent to the dfmp2_1 sample but uses both (equivalent) specifications of ghost atoms in a manual counterpoise correction. |
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density fitted REMP/cc-pVDZ energies for the CH3 radical |
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RHF CCSD(T) cc-pVDZ frozen-core energy of C4NH4 Anion |
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Second-order SCF convergnece: Benzene |
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SAPT0 aug-cc-pVTZ computation of the charge transfer energy of the water dimer. |
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Test QCISD(T) for H2O/cc-pvdz Energy |
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Tests SCF gradient in the presence of a dipole field |
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OMP2 cc-pVDZ energy for the NO molecule. |
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DFT Functional Test all values update for new BraggSlater radii |
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MP2.5 cc-pVDZ gradient for the H2O molecule. |
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meta-GGA gradients of water and ssh molecules reference gradients updated due to new BraggSlater radii |
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Triple and Singlet Oxygen energy SOSCF, also tests non-symmetric density matrices |
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Frozen-core CCSD(ROHF)/cc-pVDZ on CN radical with disk-based AO algorithm |
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OMP2.5 cc-pVDZ energy for the H2O molecule. |
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SCF cc-pVDZ geometry optimzation, with Z-matrix input |
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mtd/basis syntax examples |
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many-body different levels of theory on each body of helium tetramer |
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UHF-CCSD(T)/cc-pVDZ |
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Extrapolated energies with delta correction |
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OMP2 cc-pVDZ energy for the H2O molecule. |
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SAPT0 open-shell computation of H2O-HO2 interaction energy First with cc-pVDZ and density fitted integrals with UHF Then with 6-31g and direct integrals, except for dispersion that is computed with cc-pVDZ-ri density fitting with UHF. |
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An example of using BLAS and LAPACK calls directly from the Psi input file, demonstrating |
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SCF DZ finite difference frequencies by energies for C4NH4 |
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Cholesky decomposed REMP/cc-pVDZ energies for the CO2 molecule. |
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OMP2 cc-pVDZ gradient for the H2O molecule. |
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ROHF frontier orbitals of CH2(s) and CH2(t). |
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DCT calculation for the HF+ using DC-06 functional. This performs both two-step and simultaneous update of the orbitals and cumulant using DIIS extrapolation. Four-virtual integrals are first handled in the MO Basis for the first two energy computations. In the next two the ao_basis=disk algorithm is used, where the transformation of integrals for four-virtual case is avoided. The computation is then repeated using the DC-12 functional with the same algorithms. |
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A test of the basis specification. Various basis sets are specified outright and in blocks, both orbital and auxiliary. Constructs libmints BasisSet objects through the constructor that calls qcdb.BasisSet infrastructure. Checks that the resulting bases are of the right size and checks that symmetry of the Molecule observes the basis assignment to atoms. |
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CCSD/cc-pVDZ optical rotation calculation (length gauge only) on Z-mat H2O2 |
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6-31G** H2O Test RASSCF Energy Point will default to only singles and doubles in the active space |
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MOM excitation from LUMO HOMO+4 |
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Cholesky decomposed REMP/cc-pVDZ energies for the CH3 radical |
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RHF orbitals and density for water. |
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CI/MCSCF cc-pvDZ properties for Potassium nitrate (rocket fuel!) |
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DF-CCSD(T) cc-pVDZ energy for the NH molecule. |
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BH single points, checking that program can run multiple instances of DETCI in a single input, without an intervening clean() call |
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CASSCF/6-31G** energy point |
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Test if the the guess read in the same basis converges. |
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UHF-ODC-12 and RHF-ODC-12 single-point energy for H2O. This performs a simultaneous update of orbitals and cumulants, using DIIS extrapolation. Four-virtual integrals are handled in the AO basis, where integral transformation is avoided. In the next RHF-ODC-12 computation, AO_BASIS=NONE is used, where four-virtual integrals are transformed into MO basis. |
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Spin-restricted DC-06 counterpart of dct1. |
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Test SCF dipole derivatives against old Psi3 reference values |
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DFT Functional Test |
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ROHF-CCSD/cc-pVDZ |
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test roundtrip-ness of dict repr for psi4.core.Molecule and qcdb.Molecule |
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Single point gradient of 1-2B1 state of H2O+ with EOM-CCSD |
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Various basis set extrapolation tests |
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SCF level shift on an ROHF computation |
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FSAPT with external charge on trimer |
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Optimization followed by frequencies H2O HF/cc-pVDZ |
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DF-A-CCSD(T) cc-pVDZ energy for the NH molecule. |
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Omega optimization for LRC functional wB97 on water |
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Test of SAD/Cast-up (mainly not dying due to file weirdness) |
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Accesses basis sets, databases, plugins, and executables in non-install locations |
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UHF->UHF stability analysis test for BH with cc-pVDZ Test direct SCF with and without symmetry, test PK without symmetry |
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DF-OMP3 cc-pVDZ gradients for the H2O molecule. |
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MP2 with a PBE0 reference computation |
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DFT custom functional test |
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RHF 6-31G** energy of water, using the MCSCF module and Z-matrix input. |
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cc-pvdz H2O Test ACPF Energy/Properties |
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This test case shows an example of running and analyzing a difference F-SAPT0/jun-cc-pvdz procedure for phenol dimer from the S22 database. |
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Mk-MRCCSD(T) single point. |
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A demonstration of mixed Cartesian/ZMatrix geometry specification, using variables, for the benzene-hydronium complex. Atoms can be placed using ZMatrix coordinates, whether they belong to the same fragment or not. Note that the Cartesian specification must come before the ZMatrix entries because the former define absolute positions, while the latter are relative. |
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td-wb97x singlet excitation energies of methylene (tda) |
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DC-06 calculation for the O2 molecule (triplet ground state). This performs geometry optimization using two-step and simultaneous solution of the response equations for the analytic gradient. |
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DF-MP2 cc-pVDZ gradient for the NO molecule. |
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DF-OMP2.5 cc-pVDZ gradients for the H2O+ cation. |
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CONV SCF 6-31G analytical vs finite-difference tests Tests UHF hessian code for Ca != Cb |
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External potential calculation involving a TIP3P water and a QM water for DFMP2. Finite different test of the gradient is performed to validate forces. |
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RHF Density Matrix based-Integral Screening Test for water |
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He2+ FCI/cc-pVDZ Transition Dipole Moment |
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Mk-MRCCSD(T) single point. |
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DF-CCSD(T) cc-pVDZ gradient for the NH molecule. |
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Tests DF-MP2 gradient in the presence of a dipole field |
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Test parsed and exotic calls to energy() like zapt4, mp2.5, and cisd are working |
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Test Gibbs free energies at 298 K of N2, H2O, and CH4. |
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Test of all different algorithms and reference types for SCF, on singlet and triplet O2, using the cc-pVTZ basis set. |
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OMP3 cc-pVDZ energy for the H2O molecule |
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H2 with tiny basis set, to test basis set parser’s handling of integers |
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RHF-CC2-LR/cc-pVDZ optical rotation of H2O2. gauge = both, omega = (589 355 nm) |
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This is a shorter version if isapt1 - does not do cube plots. See isapt1 for full details |
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6-31G** H2O Test CISD Energy Point with subspace collapse |
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DF-CCSD cc-pVDZ gradients for the H2O molecule. |
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Numpy interface testing |
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Compute three IP and 2 EA’s for the PH3 molecule |
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An example of using BLAS and LAPACK calls directly from the Psi input file, demonstrating matrix multiplication, eigendecomposition, Cholesky decomposition and LU decomposition. These operations are performed on vectors and matrices provided from the Psi library. |
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Mk-MRPT2 single point. |
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Various extrapolated optimization methods for the H2 molecule |
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MP2/aug-cc-pv[DT]Z many body energies of an arbitrary Helium complex Size vs cost tradeoff is rough here |
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Mk-MRCCSD frequencies. |
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Analytic SVWN frequencies, compared to finite difference values |
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DFT Functional Test |
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Benzene Dimer DF-HF/cc-pVDZ |
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The multiple guesses for DCT amplitudes for ODC-12. |
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DF-OMP2.5 cc-pVDZ gradients for the H2O molecule. |
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MBIS calculation on ZnO |
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6-31G** H2O CCSD optimization by energies, with Z-Matrix input |
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6-31G H2O Test FCI Energy Point |
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Test of the superposition of atomic densities (SAD) guess, using a highly distorted water geometry with a cc-pVDZ basis set. This is just a test of the code and the user need only specify guess=sad to the SCF module’s (or global) options in order to use a SAD guess. The test is first performed in C2v symmetry, and then in C1. |
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Test initial SCF guesses on FH and FH+ in cc-pVTZ basis |
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Water-Argon complex with ECP present; check of UHF Hessian |
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OMP3 cc-pCVDZ energy with ROHF initial guess for the NO radical |
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wB97X-D cc-pVDZ gradient of S22 HCN update df/pk_ref values due to new BraggSlater radii |
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optimization with method defined via cbs |
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EOM-CCSD/cc-pVDZ on H2O2 with two excited states in each irrep |
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Various constrained energy minimizations of HOOH with cc-pvdz RHF. Cartesian-coordinate constrained optimizations of HOOH in internals. |
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H2O CISD/6-31G** Optimize Geometry by Energies |
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RHF aug-cc-pVQZ energy for the BH molecule, with Cartesian input. Various gradients for a strained helium dimer and water molecule |
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Scan fractional occupation of electrons updated values due to new BraggSlater radii |
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RHF-CCSD(T) cc-pVQZ frozen-core energy of the BH molecule, with Cartesian input. This version tests the FROZEN_DOCC option explicitly |
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6-31G** H2O Test CISD Energy Point |
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OLCCD cc-pVDZ freqs for C2H2 |
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Ne atom RASCI/cc-pVQZ Example of split-virtual CISD[TQ] from Sherrill and Schaefer, J. Phys. Chem. XXX This uses a “primary” virtual space 3s3p (RAS 2), a “secondary” virtual space 3d4s4p4d4f (RAS 3), and a “tertiary” virtual space consisting of the remaining virtuals. First, an initial CISD computation is run to get the natural orbitals; this allows a meaningful partitioning of the virtual orbitals into groups of different importance. Next, the RASCI is run. The split-virtual CISD[TQ] takes all singles and doubles, and all triples and quadruples with no more than 2 electrons in the secondary virtual subspace (RAS 3). If any electrons are present in the tertiary virtual subspace (RAS 4), then that excitation is only allowed if it is a single or double. |
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updated dldf reference to new BraggSlater radii Dispersionless density functional (dlDF+D) internal match to Psi4 Extensive testing has been done to match supplemental info of Szalewicz et. al., Phys. Rev. Lett., 103, 263201 (2009) and Szalewicz et. al., J. Phys. Chem. Lett., 1, 550-555 (2010) |
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Check that basis sets can be input with explicit angular momentum format |
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DF-MP2 cc-pVDZ gradients for the H2O molecule. |
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OMP2 cc-pVDZ energy for the H2O molecule. |
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DF-CCD cc-pVDZ energy for the H2O molecule. |
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DFT Functional Test for Range-Seperated Hybrids and Ghost atoms |
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RHF-CC2-LR/cc-pVDZ dynamic polarizabilities of HOF molecule. |
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DF-BP86-D2 cc-pVDZ frozen core gradient of S22 HCN update ref gradient due to new BraggSlater radii |
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Various gradients for a strained helium dimer and water molecule |
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test FCIDUMP functionality for rhf/uhf |
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Restricted DF-DCT ODC-12 energies with linearly dependent basis functions |
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check SP basis Fortran exponent parsing |
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SCF level shift on an RKS computation |
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SCF cc-pVTZ geometry optimzation, with Z-matrix input |
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Density fitted MP2 energy of H2, using density fitted reference and automatic looping over cc-pVDZ and cc-pVTZ basis sets. Results are tabulated using the built in table functions by using the default options and by specifiying the format. |
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td-wb97x excitation energies of singlet states of h2o, wfn passing |
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TCSCF cc-pVDZ energy of asymmetrically displaced ozone, with Z-matrix input. |
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ROHF-CCSD cc-pVDZ frozen-core energy for the |
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DF-OMP2.5 cc-pVDZ energy for the H2O+ cation |
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SCF/cc-pVDZ optimization example with frozen cartesian |
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SCF STO-3G finite-difference tests |
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ROHF-CCSD cc-pVDZ energy for the |
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Computation of NoCP-corrected water trimer gradient (geometry from J. Chem. Theory Comput. 11, 2126-2136 (2015)) |
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DF-CCSD(AT) cc-pVDZ energy for the H2O molecule. |
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comparison of MP2-F12 with MPQC4 Note: MPQC4 does not use robust DF for DF-MP2-F12 MP2 convergence requires that e_conv and d_conv are 1e-10 |
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Triple and Singlet Oxygen energy SOSCF, also tests non-symmetric density matrices |
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6-31G H2O Test for coverage |
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Compute the dipole polarizability for water with custom basis set. |
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RHF-CC2-LR/STO-3G optical rotation of (S)-methyloxirane. gauge = both, omega = (589 355 nm) |
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LibXC density screening test. Tests empty, C-only, X-only and XC superfunctionals. ‘super_mix’ showcases how to use different screening values for X and C parts. SCF will fail or crash (nans) without screening! |
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OMP2 cc-pVDZ energy for the NO molecule. |
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Mk-MRCCSD(T) single point. |
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DFT JK on-disk test |
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integral conventional OO-REMP/cc-pVDZ engrad single points for the H2O molecule. |
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DF-SCF cc-pVDZ of benzene-hydronium ion, scanning the dissociation coordinate with Python’s built-in loop mechanism. The geometry is specified by a Z-matrix with dummy atoms, fixed parameters, updated parameters, and separate charge/multiplicity specifiers for each monomer. One-electron properties computed for dimer and one monomer. |
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6-31G H2O Test FCI Energy Point |
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MP2 cc-pvDZ properties for Nitrogen oxide |
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DC-06, DC-12, ODC-06 and ODC-12 calculation for the He dimer. This performs a simultaneous update of the orbitals and cumulant, using DIIS extrapolation. Four-virtual integrals are handled in the MO Basis. |
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Multilevel computation of water trimer energy (geometry from J. Chem. Theory Comput. 11, 2126-2136 (2015)) |
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Gradient regularized asymptotic correction (GRAC) test. |
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Patch of a glycine with a methyl group, to make alanine, then DF-SCF energy calculation with the cc-pVDZ basis set |
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Test of the superposition of atomic densities (SAD) guess, using a highly distorted water geometry with a cc-pVDZ basis set. This is just a test of the code and the user need only specify guess=sad to the SCF module’s (or global) options in order to use a SAD guess. The test is first performed in C2v symmetry, and then in C1. |
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Extrapolated water energies - conventional integrals version |
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External potential calculation involving a TIP3P water and a QM water. Finite different test of the gradient is performed to validate forces. |
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Sample HF/cc-pVDZ H2O computation |
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Various DCT analytic gradients for the O2 molecule with 6-31G basis set |
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OLCCD cc-pVDZ gradient for the H2O molecule. |
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Single-point gradient, analytic and via finite-differences of 2-1A1 state of H2O with EOM-CCSD |
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incremental Cholesky filtered SCF |
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reproduces dipole moments in J.F. Stanton’s “biorthogonal” JCP paper |
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SCF with various combinations of pk/density-fitting, castup/no-castup, and spherical/cartesian settings. Demonstrates that puream setting is getting set by orbital basis for all df/castup parts of calc. Demonstrates that answer doesn’t depend on presence/absence of castup. Demonstrates (by comparison to castup3) that output file doesn’t depend on options (scf_type) being set global or local. This input uses global. |
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MOM excitation from LUMO HOMO+3 |
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SCF with various combinations of pk/density-fitting, castup/no-castup, and spherical/cartesian settings. Demonstrates that puream setting is getting set by orbital basis for all df/castup parts of calc. Demonstrates that answer doesn’t depend on presence/absence of castup. Demonstrates (by comparison to castup2) that output file doesn’t depend on options (scf_type) being set global or local. This input uses local. |
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Double-hybrid density functional B2PYLP. Reproduces portion of Table I in S. Grimme’s J. Chem. Phys 124 034108 (2006) paper defining the functional. |
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This test case shows an example of running the I-SAPT0/jun-cc-pVDZ computation for 2,4-pentanediol (targeting the intramolecular hydrogen bond between the two hydroxyl groups) The SIAO1 link partitioning algorithm is used. An F-SAPT partitioning follows I-SAPT. |
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integral conventional OO-REMP/cc-pVDZ engrad single points for the H2O molecule. single point energies were independently checked using the original wavels code |
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SCF/sto-3g optimization with a hessian every step |
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DF-SCF cc-pVDZ multipole moments of benzene, up to 7th order and electrostatic potentials evaluated at the nuclear coordinates |
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td-uhf test on triplet states of methylene (tda), wfn passing |
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Extrapolated water energies - density-fitted version |
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Mk-MRCCSD(T) single point. |
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6-31G* C2 Test RASCI Energy Point, testing two different ways of specifying the active space, either with the ACTIVE keyword, or with RAS1, RAS2, RESTRICTED_DOCC, and RESTRICTED_UOCC |
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Test of SFX2C-1e on Water uncontracted cc-pVDZ The reference numbers are from Lan Cheng’s implementation in Cfour |
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SCS-OMP3 cc-pVDZ geometry optimization for the H2O molecule. |
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External potential calculation involving a TIP3P water and a QM water. Gradient on the external charges is compared to gradient on the QM atoms to validate the gradient on the charges. |
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RHF/cc-pvdz-decontract HCl single-point energy Testing the in line -decontract option for basis sets |
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Advanced python example sets different sets of scf/post-scf conv crit and check to be sure computation has actually converged to the expected accuracy. |
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Test individual integral objects for correctness. |
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All-electron MP2 6-31G** geometry optimization of water |
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Matches Table II a-CCSD(T)/cc-pVDZ H2O @ 2.5 * Re value from Crawford and Stanton, IJQC 98, 601-611 (1998). |
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RHF-EOM-CC2/cc-pVDZ lowest two states of each symmetry of H2O. |
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DFT (hybrids) test of implementations in: hybrid_superfuncs.py |
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UFH and B3LYP cc-pVQZ properties for the CH2 molecule. |
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Single point gradient of 1-2B2 state of H2O+ with EOM-CCSD |
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Vibrational and thermo analysis of water trimer (geometry from J. Chem. Theory Comput. 11, 2126-2136 (2015)) |
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Test G2 method for H2O |
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Extrapolated water energies |
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A general test of the MintsHelper function |
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External potential calculation involving a TIP3P water and a QM water. Energies and gradients computed using analytic charge embedding through the external_potentials keyword are compared against those evaluated numerically through the EMBPOT functionality. |
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OLCCD cc-pVDZ energy with B3LYP initial guess for the NO radical |
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Computation of VMFC-corrected water trimer gradient (geometry from J. Chem. Theory Comput. 11, 2126-2136 (2015)) |
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DF-CCSD cc-pVDZ gradients for the H2O molecule. |
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check nonphysical masses possible |
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Unrestricted DF-DCT ODC-12 gradient for O2 with cc-pVTZ/cc-pVTZ-RI standard/auxiliary basis set |
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MP2/aug-cc-pvDZ many body energies of an arbitrary Helium complex, addressing 4-body formulas |
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Analytic UKS SVWN frequencies, compared to finite difference values |
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Extrapolated water energies |
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ZAPT(n)/6-31G NH2 Energy Point, with n=2-25 |
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Tests SAPT0-D corrections, with a variety of damping functions/parameters |
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Tests CCENERGY’s CCSD gradient in the presence of a dipole field |
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Restricted DF-DCT ODC-12 gradient for ethylene with cc-pVDZ/cc-pVDZ-RI standard/auxiliary basis set |
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DF-BP86-D2 cc-pVDZ frozen core gradient of S22 HCN updated ref gradient due to new BraggSlater radii |
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Tests CAM gradients with and without XC pieces to narrow grid error |
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Tests all grid pruning options available and screening of small weights. Check against grid size. |
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OMP2 cc-pVDZ gradient for the NO radical |
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SAPT0(ROHF) open-shell computation of CN - Ne interaction energy First with jun-cc-pVDZ and density fitted integrals with ROHF Then with cc-pVDZ and direct integrals, except for dispersion that is computed with cc-pVDZ-ri density fitting with ROHF. |
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RHF Linear Exchange Algorithm test for water |
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DF-CCDL cc-pVDZ energy for the H2O molecule. |
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td-camb3lyp with DiskDF and method/basis specification |
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Patch of a glycine with a methyl group, to make alanine, then DF-SCF energy calculation with the cc-pVDZ basis set |
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DCT calculation for the triplet O2 using DC-06 and DC-12. Only two-step algorithm is tested. |
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CC2(RHF)/cc-pVDZ energy of H2O. |
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Test computing values of basis functions (puream and non-puream) at points |
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UHF-CCSD(T) cc-pVDZ frozen-core energy for the |
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CC3(UHF)/cc-pVDZ H2O |
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CCSD/cc-pVDZ optical rotation calculation (both gauges) on Cartesian H2O2 |
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CC3(ROHF)/cc-pVDZ H2O |
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Tests SAPT0-D corrections, with a variety of damping functions/parameters |
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SAPT(DFT) aug-cc-pVDZ computation for the water dimer interaction energy. |
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MP2 cc-pVDZ gradient for the NO radical |
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Computation of CP-corrected water trimer gradient (geometry from J. Chem. Theory Comput. 11, 2126-2136 (2015)) |
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Similar to mints2, but using the BSE to specify the basis sets |
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MBIS calculation on OH- (Expanded Arrays) |
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Carbon/UHF Fractionally-Occupied SCF Test Case |
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EDIIS test case from 10.1063/1.1470195 |
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UHF and ROHF Linear Exchange Algorithm test for benzyl cation |
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6-31G** H2O+ Test CISD Energy Point |
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Test SAD SCF guesses on noble gas atom |
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Example of state-averaged CASSCF for the C2 molecule |
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OLCCD cc-pVDZ gradient for the NO radical |
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MBIS calculation on H2O |
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Transition-state optimizations of HOOH to both torsional transition states. |
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SAPT2+3 with S^inf exch-ind30 Geometries taken from the S66x10 database, the shortest-range point (R = 0.7 R_e) |
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Check that C++ Molecule class and qcdb molecule class are reading molecule input strings identically |